About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides12426PIKACHURIN-LIKE PROTEIN
Paelopatides12427MULTICOPPER OXIDASE-RELATED
Paelopatides12428-
Paelopatides12429ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides12430-
Paelopatides12431PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides12432PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides12433LATROPHILIN RECEPTOR-LIKE PROTEIN A
Paelopatides12434XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER
Paelopatides12435PROTEIN CBG26694
Paelopatides12436PARANEOPLASTIC ANTIGEN
Paelopatides12437-
Paelopatides12438-
Paelopatides12439CTCL TUMOR ANTIGEN HD-CL-01
Paelopatides12440ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides12441ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides12442KINETOCHORE SCAFFOLD 1
Paelopatides12443SI:CH211-196P9.1-RELATED
Paelopatides12444PAIRED BOX PROTEIN PAX-6-RELATED-RELATED
Paelopatides12445PAX6 NEIGHBOR PROTEIN PAXNEB
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