The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000072l.117 | TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS |
PMEG.utg000072l.118 | HOMEOBOX PROTEIN MOX |
PMEG.utg000072l.119 | HOMEOBOX PROTEIN MOX |
PMEG.utg000072l.12 | NUCLEOTIDE KINASE |
PMEG.utg000072l.120 | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER |
PMEG.utg000072l.121 | HEAT SHOCK PROTEIN 70KDA |
PMEG.utg000072l.122 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
PMEG.utg000072l.123 | URIDINE PHOSPHORYLASE |
PMEG.utg000072l.124 | E3 UBIQUITIN-PROTEIN LIGASE COP1 |
PMEG.utg000072l.125 | RAB9 EFFECTOR PROTEIN WITH KELCH MOTIFS |
PMEG.utg000072l.126 | PROTEIN VAV |
PMEG.utg000072l.127 | PROTEIN VAV |
PMEG.utg000072l.128 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
PMEG.utg000072l.129 | |
PMEG.utg000072l.13 | |
PMEG.utg000072l.130 | SRCR DOMAIN-CONTAINING PROTEIN |
PMEG.utg000072l.131 | SRCR DOMAIN-CONTAINING PROTEIN |
PMEG.utg000072l.132 | SRCR DOMAIN-CONTAINING PROTEIN |
PMEG.utg000072l.133 | SRCR DOMAIN-CONTAINING PROTEIN |
PMEG.utg000072l.135 | SRCR DOMAIN-CONTAINING PROTEIN |
PMEG.utg000072l.136 | SRCR DOMAIN-CONTAINING PROTEIN |
PMEG.utg000072l.137 | LYSYL OXIDASE-LIKE-RELATED |
PMEG.utg000072l.138 | EPITHELIAL MEMBRANE PROTEIN-RELATED |
PMEG.utg000072l.139 | SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS |
PMEG.utg000072l.14 | UNC80 |
PMEG.utg000072l.140 | UNCHARACTERIZED |
PMEG.utg000072l.141 | UNCHARACTERIZED |
PMEG.utg000072l.142 | MICROSOMAL GLUTATHIONE S-TRANSFERASE 1 |
PMEG.utg000072l.143 | MICROSOMAL GLUTATHIONE S-TRANSFERASE 1 |
PMEG.utg000072l.144 | |
PMEG.utg000072l.145 | GENERAL TRANSCRIPTION FACTOR IIIC, POLYPEPTIDE 5 |
PMEG.utg000072l.146 | LAMIN DM0-RELATED |
PMEG.utg000072l.147 | OS06G0237300 PROTEIN |
PMEG.utg000072l.148 | INOSITOL POLYPHOSPHATE 5-PHOSPHATASE E |
PMEG.utg000072l.149 | UPF0315 PROTEIN-RELATED |
PMEG.utg000072l.15 | |
PMEG.utg000072l.150 | LAMIN DM0-RELATED |
PMEG.utg000072l.151 | CHITIN SYNTHASE |
PMEG.utg000072l.152 | SOLUTE CARRIER FAMILY 39 |
PMEG.utg000072l.153 | MYD88 |
PMEG.utg000072l.154 | NADH-UBIQUINONE OXIDOREDUCTASE |
PMEG.utg000072l.155 | MYOSIN LIGHT CHAIN 1, 3 |
PMEG.utg000072l.156 | POLY A POLYMERASE CID PAP -RELATED |
PMEG.utg000072l.157 | UNCHARACTERIZED |
PMEG.utg000072l.158 | ZINC FINGER PROTEIN 183 |
PMEG.utg000072l.159 | D-RIBITOL-5-PHOSPHATE CYTIDYLYLTRANSFERASE |
PMEG.utg000072l.16 | MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED |
PMEG.utg000072l.160 | MITOTIC AND DNA DAMAGE CHECKPOINT PROTEIN HUS1 |
PMEG.utg000072l.161 | MITOTIC AND DNA DAMAGE CHECKPOINT PROTEIN HUS1 |
PMEG.utg000072l.162 | IQ CALMODULIN-BINDING MOTIF CONTAINING PROTEIN 1 |