About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides13693-
Paelopatides13694IST1 FAMILY MEMBER
Paelopatides13695-
Paelopatides13696REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides13697ZINC FINGER PROTEIN
Paelopatides13698-
Paelopatides13699-
Paelopatides13700TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides13701PROTEIN CBG26694
Paelopatides13702ENDONUCLEASE-RELATED
Paelopatides13703SOLUTE CARRIER FAMILY 13 MEMBER
Paelopatides13704DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED
Paelopatides13705-
Paelopatides13706-
Paelopatides13707TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides13708POL PROTEIN
Paelopatides13709POL PROTEIN
Paelopatides13710PROTEIN CBG26694
Paelopatides13711ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides13712DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
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