About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides13713PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides13714-
Paelopatides13715-
Paelopatides13716BETA-GLUCURONIDASE
Paelopatides13717UNCHARACTERIZED
Paelopatides13718ES-2 PROTEIN - RELATED
Paelopatides13719PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides13720RETROTRANSPOSON
Paelopatides13721FI04643P-RELATED
Paelopatides13722PROTEIN CBG26694
Paelopatides13724FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides13725FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides13727-
Paelopatides13728MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides13729-
Paelopatides13730HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides13731INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER
Paelopatides13732-
Paelopatides13733AP ENDONUCLEASE
Paelopatides13734NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
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