About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides13613-
Paelopatides13614-
Paelopatides13615REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides13616L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides13617-
Paelopatides13618LEUCINE RICH REPEAT FAMILY PROTEIN
Paelopatides13619-
Paelopatides13620HSC70-INTERACTING PROTEIN
Paelopatides13621PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides13622D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL
Paelopatides13623COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Paelopatides13624PROTEIN CBG26694
Paelopatides13625ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides13626PROTEIN CBG26694
Paelopatides13627SOLUTE CARRIER FAMILY 5
Paelopatides13628REVERSE TRANSCRIPTASE
Paelopatides13629-
Paelopatides13630DNA HELICASE RECQ FAMILY MEMBER
Paelopatides13631TUBULIN
Paelopatides13632TUBULIN
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