About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides13633TUBULIN
Paelopatides13634TUBULIN
Paelopatides13635-
Paelopatides13636TUBULIN
Paelopatides13637TUBULIN
Paelopatides13638TUBULIN
Paelopatides13639TUBULIN
Paelopatides13640TUBULIN
Paelopatides13641OS01G0282866 PROTEIN
Paelopatides13642TUBULIN
Paelopatides13643GAG-RELATED PROTEIN
Paelopatides13644TRANSPOSASE, PUTATIVE-RELATED
Paelopatides13645ENZYMATIC POLYPROTEIN-RELATED
Paelopatides13646POL PROTEIN
Paelopatides13647TUDOR DOMAIN CONTAINING PROTEIN
Paelopatides13648GLYCOSYLTRANSFERASE
Paelopatides13649-
Paelopatides13650-
Paelopatides13651REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides13652-
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