About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides13653-
Paelopatides13654B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides13655TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides1365652 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides13657FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides13658PROTEIN CBG26694
Paelopatides13659ASTEROID PROTEIN
Paelopatides13660-
Paelopatides13661-
Paelopatides13662EGF-LIKE-DOMAIN, MULTIPLE 7, 8
Paelopatides13663DISULFIDE OXIDOREDUCTASE
Paelopatides13664-
Paelopatides13665-
Paelopatides13666OS01G0750732 PROTEIN
Paelopatides13667TRNA 5-METHYLAMINOMETHYL-2-THIOURIDYLATE -METHYLTRANSFERASE
Paelopatides13668-
Paelopatides13669SKELETOR-RELATED
Paelopatides13670MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN
Paelopatides13671O-ACYLTRANSFERASE
Paelopatides13672ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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