About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides13884-
Paelopatides13885REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides13886NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides13887SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
Paelopatides13888B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides13889-
Paelopatides13890MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5
Paelopatides13892RAS-RELATED PROTEIN RAB
Paelopatides13893PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
Paelopatides13894-
Paelopatides13895NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides13896-
Paelopatides13897-
Paelopatides13898GPI-ANCHORED PROTEIN P137
Paelopatides13899PROTEIN CBG26694
Paelopatides13900-
Paelopatides13901ENDONUCLEASE-RELATED
Paelopatides13902-
Paelopatides13904REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides13905SOLUTE CARRIER FAMILY 22 MEMBER
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