About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides13800-
Paelopatides13801-
Paelopatides13802-
Paelopatides13803-
Paelopatides13804MUTATED IN BLADDER CANCER 1
Paelopatides13805PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER
Paelopatides13806CYTOCHROME P450 508A4-RELATED
Paelopatides13807BONUS, ISOFORM C-RELATED
Paelopatides13808ENZYMATIC POLYPROTEIN-RELATED
Paelopatides13809-
Paelopatides13810-
Paelopatides13812-
Paelopatides13813-
Paelopatides13814PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides13815NEUROPEPTIDES RECEPTOR
Paelopatides13816HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides13817BONUS, ISOFORM C-RELATED
Paelopatides13818-
Paelopatides13819-
Paelopatides13820-
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