About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides13864-
Paelopatides13865-
Paelopatides13866-
Paelopatides13867POLYPROTEIN, PUTATIVE-RELATED
Paelopatides13868ATP-DEPENDENT DNA HELICASE
Paelopatides13869-
Paelopatides13870PROPERDIN
Paelopatides13871PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides13872-
Paelopatides13873-
Paelopatides13874-
Paelopatides13875ALKALINE CERAMIDASE
Paelopatides13876REVERSE TRANSCRIPTASES
Paelopatides13877PROTEIN FMC1 HOMOLOG
Paelopatides13878-
Paelopatides13879CYTOCHROME P450 FAMILY 1
Paelopatides13880CYTOCHROME P450 508A4-RELATED
Paelopatides13881FORKHEAD BOX PROTEIN
Paelopatides13882-
Paelopatides13883-
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