About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides13841-
Paelopatides13842REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides13843FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides13844EXPRESSED PROTEIN
Paelopatides13848-
Paelopatides13849RAD50
Paelopatides13850CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides13851ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Paelopatides13852PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides138532',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE
Paelopatides13854BUCENTAUR RELATED
Paelopatides13855REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides13856-
Paelopatides13857-
Paelopatides13858-
Paelopatides13859G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides13860RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Paelopatides13861-
Paelopatides13862-
Paelopatides13863EXPRESSED PROTEIN
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