About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides13777EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11
Paelopatides13778PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides13779PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides13781FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides13782-
Paelopatides13783-
Paelopatides13784PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides13785-
Paelopatides13786-
Paelopatides13787BUCENTAUR RELATED
Paelopatides13788-
Paelopatides13789PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides13790GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 2
Paelopatides13791EPM2A-INTERACTING PROTEIN 1
Paelopatides13792GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 2
Paelopatides13793EPM2A-INTERACTING PROTEIN 1
Paelopatides13794PROTEIN CBG26694
Paelopatides13795PEPTIDASE
Paelopatides13798RETROTRANSPOSON
Paelopatides13799-
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