About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides14079PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides14080PROTEIN CBG26694
Paelopatides14081-
Paelopatides14082UNCHARACTERIZED
Paelopatides1408452 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides14085FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides14086PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides14087PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides14088-
Paelopatides14089BETA-GALACTOSIDASE RELATED
Paelopatides14090-
Paelopatides14091NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides14092-
Paelopatides14093TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides14094-
Paelopatides14095-
Paelopatides14096-
Paelopatides14097DIMETHYLADENOSINE TRANSFERASE
Paelopatides14098ADP RIBOSYLATION FACTOR-RELATED
Paelopatides14099INACTIVE TYROSINE-PROTEIN KINASE 7
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