About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides14100-
Paelopatides14101-
Paelopatides14102-
Paelopatides14103-
Paelopatides14104PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides14105SI:CH211-108C17.2-RELATED-RELATED
Paelopatides14106ZGC:195170
Paelopatides14107HEPATOMA-DERIVED GROWTH FACTOR-RELATED
Paelopatides14108CELL DIVISION PROTEIN KINASE
Paelopatides14109PROTEIN ABHD14B-LIKE
Paelopatides14110-
Paelopatides14111-
Paelopatides14112-
Paelopatides14113DNAJ HOMOLOG SUBFAMILY C MEMBER 16
Paelopatides14114-
Paelopatides14115SULFATE TRANSPORTER
Paelopatides14116HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER
Paelopatides14117-
Paelopatides14118-
Paelopatides14119-
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