About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides14057REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides14058FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides14059FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides14060NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides14061ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides14062-
Paelopatides14063-
Paelopatides14064-
Paelopatides14065-
Paelopatides14066YIPPEE DOMAIN-CONTAINING PROTEIN
Paelopatides14067ZGC:195170
Paelopatides14068-
Paelopatides14069-
Paelopatides14070ENZYMATIC POLYPROTEIN-RELATED
Paelopatides14071ENDONUCLEASE-RELATED
Paelopatides14072INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides14073ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides14074RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides14077PROTEIN CBG26694
Paelopatides14078NUCLEAR EXPORT MEDIATOR FACTOR NEMF
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