About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides14503CYTOKINE RECEPTOR
Paelopatides14506EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED
Paelopatides14507FACIOGENITAL DYSPLASIA PROTEIN
Paelopatides14508ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides14509GUANINE NUCLEOTIDE EXCHANGE FACTOR
Paelopatides14510REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides14512EXPRESSED PROTEIN
Paelopatides14513-
Paelopatides14514-
Paelopatides14515-
Paelopatides14516G PROTEIN-COUPLED RECEPTOR 157-RELATED
Paelopatides14517ACYL-COA DEHYDROGENASE
Paelopatides14518MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED
Paelopatides14519DRAB11-RELATED
Paelopatides14520REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides14521ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides14522ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF-CONTAINING PROTEIN 1
Paelopatides14523TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides14524-
Paelopatides14525ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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