About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides14395REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides14396ENZYMATIC POLYPROTEIN-RELATED
Paelopatides14397TRANSPOSON
Paelopatides14398TESTICULAR HAPLOID EXPRESSED GENE PROTEIN
Paelopatides14399PROTEIN CBG26694
Paelopatides14401WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED
Paelopatides14402PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides14403-
Paelopatides14404IP13529P
Paelopatides14405EPM2A-INTERACTING PROTEIN 1
Paelopatides14406-
Paelopatides14409-
Paelopatides14410-
Paelopatides14411-
Paelopatides14412SODIUM/HYDROGEN EXCHANGER
Paelopatides14413-
Paelopatides14414-
Paelopatides14415ENDONUCLEASE-RELATED
Paelopatides14416POL PROTEIN
Paelopatides14417-
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