About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides14438BUCENTAUR RELATED
Paelopatides14439DNA-DIRECTED RNA POLYMERASE
Paelopatides14440PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides14441-
Paelopatides14442PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides14443PROTEIN CBG26694
Paelopatides14444RIBONUCLEASE
Paelopatides14445-
Paelopatides14446DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
Paelopatides14448DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
Paelopatides14449MALE FERTILITY FACTOR KL5
Paelopatides14450GAMMA TUBULIN COMPLEX PROTEIN
Paelopatides14451-
Paelopatides14452ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides14453-
Paelopatides14454PROTEIN CBG26694
Paelopatides14455ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides14456-
Paelopatides14457AMINO ACID TRANSPORTER
Paelopatides14458-
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