About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides14566REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides14567REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides14568CCHC-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides14569-
Paelopatides14570-
Paelopatides14571AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
Paelopatides14572HELICASE WITH DEATH DOMAIN-RELATED
Paelopatides14573PROTEIN CBG26694
Paelopatides14574PROFILIN
Paelopatides14575FAMILY WITH SEQUENCE SIMILARITY 228 MEMBER A
Paelopatides14576-
Paelopatides14577TRANSAMINASE
Paelopatides14579-
Paelopatides14580UNCHARACTERIZED
Paelopatides14581-
Paelopatides14582PROTEIN CBG26694
Paelopatides14583L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides14584-
Paelopatides14585SACSIN
Paelopatides14586ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN
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