About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides14800RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides14801-
Paelopatides14802ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides14803PROTEIN CBG26694
Paelopatides14804PROTEIN CBG26694
Paelopatides14805PROTEIN CBG26694
Paelopatides14806TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides14807-
Paelopatides14808-
Paelopatides14809-
Paelopatides14810OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides14811OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides14812-
Paelopatides14813-
Paelopatides14814-
Paelopatides14815EXPRESSED PROTEIN
Paelopatides14816POL PROTEIN
Paelopatides14817TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides14818-
Paelopatides14819GTP-BINDING
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