About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides14698RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Paelopatides14699APOLIPOPROTEIN L
Paelopatides14700GH3 DOMAIN-CONTAINING PROTEIN
Paelopatides14701-
Paelopatides14702-
Paelopatides14703-
Paelopatides14705REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides14706-
Paelopatides14707THIOESTERASE 1/PROTEASE 1/LYSOPHOSPHOLIPASE L1
Paelopatides14708AQUAPORIN OR AQUAGLYCEROPORIN RELATED
Paelopatides14709AMINO ACID TRANSPORTER
Paelopatides14710-
Paelopatides14711TRANSPOSON
Paelopatides14712THIOSULFATE SULFERTANSFERASE
Paelopatides14713THIOSULFATE SULFERTANSFERASE
Paelopatides14714-
Paelopatides14715IP13529P
Paelopatides14716AGAP005574-PA
Paelopatides14717-
Paelopatides14718CXC DOMAIN-CONTAINING PROTEIN-RELATED
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