About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides14719PROTEIN CBG26694
Paelopatides14720ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides14721-
Paelopatides14722-
Paelopatides14723PROTEIN CBG26694
Paelopatides14724E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
Paelopatides14725UNCHARACTERIZED
Paelopatides14727ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides14728EPM2A-INTERACTING PROTEIN 1
Paelopatides14729-
Paelopatides14730N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
Paelopatides14731N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
Paelopatides14732ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides14733ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides14734ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides14735-
Paelopatides14736TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides14737UNCHARACTERIZED
Paelopatides14738PROTEIN CBG26694
Paelopatides14739REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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