About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides14760PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides14761-
Paelopatides14762-
Paelopatides14763CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides14764B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides14765INO80 COMPLEX SUBUNIT C
Paelopatides14766METHYLTRANSFERASE-RELATED
Paelopatides14767PROTEIN CBG26694
Paelopatides14768-
Paelopatides14769LEUCINE-, GLUTAMATE- AND LYSINE-RICH PROTEIN 1
Paelopatides14770ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides14771-
Paelopatides14772CADHERIN DOMAIN-CONTAINING PROTEIN
Paelopatides14773DIABLO HOMOLOG, MITOCHONDRIAL
Paelopatides14774ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides14775BUCENTAUR RELATED
Paelopatides14776REVERSE TRANSCRIPTASES
Paelopatides14777REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides14778UNCHARACTERIZED
Paelopatides14779TETRATRICOPEPTIDE REPEAT PROTEIN 5
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