About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides15195PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY G MEMBER 7
Paelopatides15196-
Paelopatides15197-
Paelopatides15198PHOSPHOLIPASE A2 FAMILY MEMBER
Paelopatides15199REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides15200TRANSPOSASE, PUTATIVE-RELATED
Paelopatides15201TRANSPOSASE, PUTATIVE-RELATED
Paelopatides15202MATING RESPONSE PROTEIN POI2
Paelopatides15203-
Paelopatides15204-
Paelopatides15205-
Paelopatides15206-
Paelopatides15207-
Paelopatides15208HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides15209SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides15210POL PROTEIN
Paelopatides15211-
Paelopatides15212-
Paelopatides15213SI:CH211-196P9.1-RELATED
Paelopatides15214GAG-RELATED PROTEIN
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