About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides15153SULFOTRANSFERASE SULT
Paelopatides15154SULFOTRANSFERASE SULT
Paelopatides15155L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides15156-
Paelopatides15157REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides15158SOLUTE CARRIER FAMILY 39
Paelopatides15159MONOCARBOXYLATE TRANSPORTER
Paelopatides15160OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
Paelopatides15161-
Paelopatides15162-
Paelopatides15163-
Paelopatides15164-
Paelopatides15165-
Paelopatides15166ETS
Paelopatides15167-
Paelopatides15169EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
Paelopatides15170-
Paelopatides15171-
Paelopatides15172CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1
Paelopatides15173FAM13
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