About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides15073-
Paelopatides15074RNA-BINDING PROTEIN
Paelopatides15075SERINE/THREONINE-PROTEIN KINASE
Paelopatides15076PROTEIN CBG26694
Paelopatides15077TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6B
Paelopatides15078-
Paelopatides15079-
Paelopatides15080ZINC FINGER PROTEIN 200
Paelopatides15081NISCHARIN RELATED
Paelopatides15082MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S10
Paelopatides15083CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2
Paelopatides15084CRYPTOCHROME
Paelopatides15085POL PROTEIN
Paelopatides15086ENDONUCLEASE-RELATED
Paelopatides15087-
Paelopatides15088-
Paelopatides15089-
Paelopatides15090ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides15091-
Paelopatides15092ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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