About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides15255UNCHARACTERIZED
Paelopatides15256-
Paelopatides15257-
Paelopatides15258APOPTOGENIC PROTEIN 1, MITOCHONDRIAL
Paelopatides15259-
Paelopatides15260APOPTOGENIC PROTEIN 1, MITOCHONDRIAL
Paelopatides15261RBP-RELATED
Paelopatides15262RBP-RELATED
Paelopatides15263RBP-RELATED
Paelopatides15264CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides15265-
Paelopatides15266-
Paelopatides15267PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides15268OPSIN
Paelopatides15269UNCHARACTERIZED
Paelopatides15270PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides15271B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides15273-
Paelopatides15274EPM2A-INTERACTING PROTEIN 1
Paelopatides15275-
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