About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides15316-
Paelopatides15317REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides15318S -2-HYDROXY-ACID OXIDASE-RELATED
Paelopatides15319-
Paelopatides15320-
Paelopatides15321REVERSE TRANSCRIPTASES
Paelopatides15322TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides15323ACYL-COA DEHYDROGENASE
Paelopatides15324-
Paelopatides15325-
Paelopatides15326-
Paelopatides15327-
Paelopatides15328ATM INTERACTOR
Paelopatides15329ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides15330TRANSPOSABLE ELEMENT-RELATED
Paelopatides15331-
Paelopatides15332PROTEIN CBG26694
Paelopatides15333PROTEIN CBG26694
Paelopatides15334SI:CH211-196P9.1-RELATED
Paelopatides15335-
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