About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides15593EXPRESSED PROTEIN
Paelopatides15594-
Paelopatides15595-
Paelopatides15596RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
Paelopatides15598FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides15599-
Paelopatides15600RNA HELICASE
Paelopatides15601-
Paelopatides15602PROTEIN CBG26694
Paelopatides15603-
Paelopatides15604-
Paelopatides15605REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides15606-
Paelopatides156075-HYDROXYTRYPTAMINE RECEPTOR
Paelopatides15608BUCENTAUR RELATED
Paelopatides15609REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides15610-
Paelopatides15611V-TYPE PROTON ATPASE SUBUNIT B
Paelopatides15612-
Paelopatides15613REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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