About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides15552TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides15553BAG FAMILY MOLECULAR CHAPERONE REGULATOR 2
Paelopatides15554RAS-RELATED PROTEIN RAB
Paelopatides15555RETROTRANSPOSON
Paelopatides15556-
Paelopatides15557POL PROTEIN
Paelopatides15558PROTEIN CBG26694
Paelopatides15559-
Paelopatides15560-
Paelopatides15562-
Paelopatides15563-
Paelopatides15564CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides15565CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides15566TRANSPOSON
Paelopatides15567DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
Paelopatides15568G PROTEIN-COUPLED RECEPTOR
Paelopatides15569POL PROTEIN
Paelopatides155705'-NUCLEOTIDASE DOMAIN-CONTAINING
Paelopatides15571GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE
Paelopatides15572HL07962P-RELATED
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