About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides15614ENDONUCLEASE-RELATED
Paelopatides15615PROTEIN CBG26694
Paelopatides15616PROTEIN CBG26694
Paelopatides15617INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides15618NY-REN-41 ANTIGEN L15 -RELATED
Paelopatides15619SODIUM/POTASSIUM/CALCIUM EXCHANGER
Paelopatides15620SODIUM/POTASSIUM/CALCIUM EXCHANGER
Paelopatides15621-
Paelopatides15622TRANSPOSABLE ELEMENT-RELATED
Paelopatides15623REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides15624MYOGENIC FACTOR
Paelopatides15625BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
Paelopatides15626-
Paelopatides15627-
Paelopatides15629TETRATRICOPEPTIDE-LIKE HELICAL
Paelopatides15630-
Paelopatides15634-
Paelopatides15635-
Paelopatides15636VACUOLAR ATP SYNTHASE SUBUNIT S1
Paelopatides15637REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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