About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides15462ENZYMATIC POLYPROTEIN-RELATED
Paelopatides15463FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides15464LEUCOKININ RECEPTOR-RELATED
Paelopatides15465LEUCOKININ RECEPTOR-RELATED
Paelopatides15466-
Paelopatides15469REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides15470SERINE PROTEASE INHIBITOR, SERPIN
Paelopatides15471ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides15472-
Paelopatides15473REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides15474REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides15475MULTICOPPER OXIDASE-RELATED
Paelopatides15476NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides15477-
Paelopatides15478SULFOTRANSFERASE SULT
Paelopatides15479-
Paelopatides15480COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED
Paelopatides15481-
Paelopatides15482-
Paelopatides15483-
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