About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides15686-
Paelopatides15687-
Paelopatides15688-
Paelopatides15689-
Paelopatides15690DNA-DIRECTED PRIMASE / POLYMERASE PROTEIN
Paelopatides15692FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides15693-
Paelopatides15694DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
Paelopatides15695REVERSE TRANSCRIPTASES
Paelopatides15696-
Paelopatides15697ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides15698ENZYMATIC POLYPROTEIN-RELATED
Paelopatides15699-
Paelopatides15700CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Paelopatides15701ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides15702PROTEIN NAKED CUTICLE
Paelopatides15703SULFOTRANSFERASE SULT
Paelopatides15704AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Paelopatides15705THIOREDOXIN DOMAIN-CONTAINING PROTEIN 11
Paelopatides15706-
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