About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides15874SERINE/THREONINE-PROTEIN KINASE TAO1-LIKE PROTEIN
Paelopatides15875SERINE/THREONINE-PROTEIN KINASE TAO1-LIKE PROTEIN
Paelopatides15877-
Paelopatides15878RETROTRANSPOSON
Paelopatides15879PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides15880-
Paelopatides15881PROTEIN CBG26694
Paelopatides15882-
Paelopatides15883-
Paelopatides15884-
Paelopatides15885-
Paelopatides15886-
Paelopatides15887-
Paelopatides15888-
Paelopatides15889-
Paelopatides15890-
Paelopatides15891PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides15892ACROSIN-RELATED
Paelopatides15893PROTEIN CBG26694
Paelopatides15894IP13529P
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