About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides15787-
Paelopatides15788L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides15789ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides15790RETROTRANSPOSON
Paelopatides15791PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides15792EPM2A-INTERACTING PROTEIN 1
Paelopatides15793L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides15794GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
Paelopatides15795-
Paelopatides15796-
Paelopatides15797REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides15798-
Paelopatides15799PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides15800TRANSCRIPTIONAL REPRESSOR PROTEIN YY
Paelopatides15801ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides15802-
Paelopatides15803METHYLTRANSFERASE N6AMT1
Paelopatides15804-
Paelopatides15805-
Paelopatides15806-
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