About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides15832MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20-RELATED
Paelopatides15833SIGNAL PEPTIDE PEPTIDASE
Paelopatides15834-
Paelopatides15835DYNEIN HEAVY CHAIN
Paelopatides15836DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
Paelopatides15837FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides15838ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2
Paelopatides15839GAG-RELATED PROTEIN
Paelopatides15840AP ENDONUCLEASE
Paelopatides15841NATTERIN-4
Paelopatides15842PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides15844-
Paelopatides15845-
Paelopatides15846-
Paelopatides15847POL PROTEIN
Paelopatides15848RAS-LIKE FAMILY MEMBER 11
Paelopatides15849ENZYMATIC POLYPROTEIN-RELATED
Paelopatides15850POL PROTEIN
Paelopatides15851-
Paelopatides15852PROTEIN CBG26694
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