About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides15959-
Paelopatides15960-
Paelopatides15961ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides15962LEUCINE RICH REPEAT FAMILY PROTEIN
Paelopatides15963-
Paelopatides15964E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
Paelopatides15965SIDESTEP PROTEIN
Paelopatides15966TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides15968-
Paelopatides15969OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides15970UNCHARACTERIZED
Paelopatides15971UNCHARACTERIZED
Paelopatides15972RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides15973RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides15974RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides15975CYTOKINE RECEPTOR
Paelopatides15976INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides15977PROTEIN CBG26694
Paelopatides15978-
Paelopatides15979-
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