About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides15980MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
Paelopatides15981-
Paelopatides15982POL PROTEIN
Paelopatides15983ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides15984ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides15985POL PROTEIN
Paelopatides15986UNCHARACTERIZED
Paelopatides15987BUCENTAUR RELATED
Paelopatides15988REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides15989REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides15990TRANSMEMBRANE PROTEIN 15-RELATED
Paelopatides15991SULFOTRANSFERASE SULT
Paelopatides15992ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides15993-
Paelopatides15994-
Paelopatides15995-
Paelopatides15996POL PROTEIN
Paelopatides15997MULTICOPPER OXIDASE-RELATED
Paelopatides15998POL PROTEIN
Paelopatides15999DNA REPLICATION REGULATOR DPB11-RELATED
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