About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides16000-
Paelopatides16001-
Paelopatides16002ACROSIN-RELATED
Paelopatides16003FI04643P-RELATED
Paelopatides16004-
Paelopatides16005-
Paelopatides16006-
Paelopatides16007-
Paelopatides16008-
Paelopatides16009ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides16010NARDILYSIN
Paelopatides16011E3 UBIQUITIN-PROTEIN LIGASE MARCH5
Paelopatides16012EPM2A-INTERACTING PROTEIN 1
Paelopatides16013CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB
Paelopatides16014-
Paelopatides16015CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB
Paelopatides16016REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16018FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides16019-
Paelopatides16020PROTEIN DOK-7
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