About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides16021ORIGIN RECOGNITION COMPLEX SUBUNIT 3
Paelopatides16022NUCLEAR MOVEMENT PROTEIN NUDC
Paelopatides16023T-CELL ACTIVATION RHO GTPASE ACTIVATING PROTEIN-RELATED
Paelopatides16024-
Paelopatides16025-
Paelopatides16026FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides16027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16028EPM2A-INTERACTING PROTEIN 1
Paelopatides16029FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides16030PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
Paelopatides16031SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides16032SEPIAPTERIN REDUCTASE
Paelopatides16033SEPIAPTERIN REDUCTASE
Paelopatides16034LISH DOMAIN-CONTAINING PROTEIN ARMC9
Paelopatides16035LISH DOMAIN-CONTAINING PROTEIN ARMC9
Paelopatides16036PARANEOPLASTIC ANTIGEN
Paelopatides16037PROTEIN CBG26694
Paelopatides16038LISH DOMAIN-CONTAINING PROTEIN ARMC9
Paelopatides16039REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16040PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
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