About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides16231MIDASIN-RELATED
Paelopatides16232MIDASIN-RELATED
Paelopatides16233-
Paelopatides16234REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16235PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides16236PROTEIN CBG26694
Paelopatides16237FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides16238THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9
Paelopatides16239-
Paelopatides16240DNA HELICASE RECQ FAMILY MEMBER
Paelopatides16241PROTEIN CBG26694
Paelopatides16242-
Paelopatides16243SCAVENGER RECEPTOR CLASS F
Paelopatides16244CALCIUM BINDING PROTEINS
Paelopatides16245-
Paelopatides1624615-HYDROXYPROSTAGLANDIN DEHYDROGENASE [NAD(+)]
Paelopatides16247-
Paelopatides16248BUCENTAUR RELATED
Paelopatides16249REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16250PROTEIN CBG26694
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