About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides16104ENDONUCLEASE-RELATED
Paelopatides16105PARANEOPLASTIC ANTIGEN
Paelopatides16106PROTEIN CBG26694
Paelopatides16107ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides16108REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16109TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides16110-
Paelopatides16111-
Paelopatides16112SPARC OSTEONECTIN
Paelopatides16113REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16114MACROGLOBULIN / COMPLEMENT
Paelopatides16115MACROGLOBULIN / COMPLEMENT
Paelopatides16116NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides16117KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Paelopatides16118TRANSPOSABLE ELEMENT-RELATED
Paelopatides16119-
Paelopatides16120DEK PROTEIN
Paelopatides16121DEK PROTEIN
Paelopatides16122NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1
Paelopatides16123DED DOMAIN-CONTAINING PROTEIN
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