About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides16507POL PROTEIN
Paelopatides16508ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides16509REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16510REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16511BEN DOMAIN-CONTAINING PROTEIN 6
Paelopatides16512PROTEIN, PUTATIVE-RELATED
Paelopatides16513F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides16514SAM DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides16515-
Paelopatides16516ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides16517PROTEIN CBG26694
Paelopatides16518PROTEIN CBG26694
Paelopatides16519-
Paelopatides16520REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16521-
Paelopatides16522RRM DOMAIN-CONTAINING PROTEIN
Paelopatides16523-
Paelopatides16524ENDONUCLEASE-RELATED
Paelopatides16525PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides16526-
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