About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides16487-
Paelopatides16488FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides16489RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1
Paelopatides16490NADH DEHYDROGENASE (UBIQUINONE) 1 BETA SUBCOMPLEX, 4
Paelopatides16491ENDONUCLEASE-RELATED
Paelopatides16492PARANEOPLASTIC ANTIGEN
Paelopatides16493-
Paelopatides16494-
Paelopatides16495F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides16496-
Paelopatides16497-
Paelopatides16498-
Paelopatides16499OLIGOPEPTIDE TRANSPORTER-RELATED
Paelopatides16500REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16501-
Paelopatides16502-
Paelopatides16503SAM-DOMAIN, SH3 AND NUCLEAR LOCALIZATION SIGNALS PROTEIN RELATED
Paelopatides16504FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides16505ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides16506WD REPEAT DOMAIN-RELATED
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