About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17817-
Paelopatides17818REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17819D-DOPACHROME DECARBOXYLASE
Paelopatides17820PROTEIN CBG26694
Paelopatides17822REVERSE TRANSCRIPTASES
Paelopatides17823PROTEIN CBG26694
Paelopatides17824RETINAL ROD RHODOPSIN-SENSITIVE CGMP 3',5'-CYCLIC PHOSPHODIESTERASE DELTA-SUBUNIT
Paelopatides17825-
Paelopatides17826MAINTENANCE OF TELOMOERE CAPPING
Paelopatides17827LAMINA-ASSOCIATED POLYPEPTIDE THYMOPOIETIN
Paelopatides17828G_PROTEIN_RECEP_F2_4 DOMAIN-CONTAINING PROTEIN
Paelopatides17829FOLLISTATIN-RELATED
Paelopatides17830DUAL SERINE/THREONINE AND TYROSINE PROTEIN KINASE
Paelopatides17831DUAL SERINE/THREONINE AND TYROSINE PROTEIN KINASE
Paelopatides17832-
Paelopatides17833TRANSPOSON
Paelopatides17834PLEXIN
Paelopatides17835-
Paelopatides17836ATP-BINDING CASSETTE SUB-FAMILY B
Paelopatides17837UTP15 U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 FAMILY MEMBER
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