About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17691REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17692HISTIDINE-RICH GLYCOPROTEIN
Paelopatides17693-
Paelopatides17694U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B
Paelopatides17695-
Paelopatides17696PROTEIN CBG26694
Paelopatides17697PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides17698PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides17699EPM2A-INTERACTING PROTEIN 1
Paelopatides17700EPM2A-INTERACTING PROTEIN 1
Paelopatides17701-
Paelopatides17702-
Paelopatides17703EG:EG0003.4 PROTEIN-RELATED
Paelopatides17704-
Paelopatides17705PROTEIN CBG26694
Paelopatides17706ENDONUCLEASE-RELATED
Paelopatides17707-
Paelopatides17708CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides17709PROTEIN CBG26694
Paelopatides17710NUCLEAR RNA EXPORT FACTOR
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