About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17838CGI-41 METHYLTRANSFERASE
Paelopatides17839-
Paelopatides17840PERILIPIN
Paelopatides17841-
Paelopatides17842UNCHARACTERIZED
Paelopatides17843ENDONUCLEASE-RELATED
Paelopatides17844IKB KINASE
Paelopatides17845BUCENTAUR RELATED
Paelopatides17846REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17847-
Paelopatides17848PROTEIN CBG26694
Paelopatides17849PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides17850PROTEIN CBG26694
Paelopatides17851ENDONUCLEASE
Paelopatides17854GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT
Paelopatides17855RETROTRANSPOSON
Paelopatides17856RETROTRANSPOSON
Paelopatides17857ENDONUCLEASE-RELATED
Paelopatides17858TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides17859EXPRESSED PROTEIN
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