About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17881ENDONUCLEASE-RELATED
Paelopatides17882-
Paelopatides17883-
Paelopatides17897-
Paelopatides17898-
Paelopatides17899SI:CH211-196P9.1-RELATED
Paelopatides17900-
Paelopatides17901LITHOSTATHINE
Paelopatides17931-
Paelopatides17932MACROGLOBULIN / COMPLEMENT
Paelopatides17933-
Paelopatides17934DNA HELICASE RECQ FAMILY MEMBER
Paelopatides17935-
Paelopatides17936REVERSE TRANSCRIPTASES
Paelopatides17937EXPRESSED PROTEIN
Paelopatides17938-
Paelopatides17939SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
Paelopatides17940-
Paelopatides17941-
Paelopatides17942TGF-BETA FAMILY
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