About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17752-
Paelopatides17753HYDROXYSTEROID DEHYDROGENASE-LIKE PROTEIN 2
Paelopatides17754ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Paelopatides17755L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides17759SI:CH211-108C17.2-RELATED-RELATED
Paelopatides17760-
Paelopatides17761-
Paelopatides17762PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides17763RETROTRANSPOSON
Paelopatides17764-
Paelopatides17765PROTEIN CBG26694
Paelopatides17766PROTEIN CBG26694
Paelopatides17767-
Paelopatides17768NEUROTRANSMITTER GATED ION CHANNEL
Paelopatides17769ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides17770-
Paelopatides17771CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides17772-
Paelopatides17773-
Paelopatides17774-
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