About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17943PROTEIN FAM204A
Paelopatides17944LIPID PHOSPHATE PHOSPHATASE
Paelopatides17945ANAPHASE-PROMOTING COMPLEX 10
Paelopatides17946GLUTAMATE SEMIALDEHYDE DEHYDROGENASE
Paelopatides17947ENDONUCLEASE-RELATED
Paelopatides17948POL PROTEIN
Paelopatides17949POL PROTEIN
Paelopatides17950-
Paelopatides17951PROTEIN CBG26694
Paelopatides17952UNCHARACTERIZED
Paelopatides17955-
Paelopatides17956-
Paelopatides17957TYROSINE-PROTEIN KINASE
Paelopatides17958SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides17959-
Paelopatides17960-
Paelopatides17961TELOMERE REPEATS-BINDING BOUQUET FORMATION PROTEIN 2
Paelopatides17962-
Paelopatides17963ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides17964ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
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